Below appear some commands used in scripts that do not appear in the message log box. The most commonly used commands can be found from the Python shell inside Continuity by doing: dir(self).

Miscellaneous

Command

import Module

Description

self.auto_update_dimensions()

auto updates dimensions within a script

Mesh

Command

import Module

Description

self.Send(None, log=0)

Send Client data (e.g. mesh data, compilable model) to Server (e.g. FE solvers)

nodes = self.stored_data.nodes.obj

load Continuity-formatted nodes file located at cwd/nodes_file

nodes.loadTableFromFile(cwd+nodes_file)

self.stored_data.store(nodes)

elems = self.stored_data.elem.obj

load Continuity-formatted elements file located at cwd/elems_file

elems.loadTableFromFile(cwd+elems_file)

self.stored_data.store(elems)

self.EScaleFactors(cwd + sfm_file, log=0)

load Continuity-formatted scale factor matrix file located at cwd/sfm_file

self.stored_data.nodes.obj.saveTable(cwd+file_nodes)

save Continuity-formatted nodes file located at cwd/file_nodes

self.stored_data.elem.obj.saveTable(cwd+file_elems)

save Continuity-formatted elements file located at cwd/file_elems

self.ExScaleFactors(cwd + file_sfm, log=0)

save Continuity-formatted scale factor matrix file located at cwd/file_sfm

Render

Command

import Module

Description

self.om.rolist[#].contours = [min,max,step]

sets the min, max, and step for use of contours with OpenMesh of index "#" in OpenMesh list

self.om.rolist[#].setScheme("RGB")

sets the color scheme to RGB (or other scheme) rather than the default BGR for index "#" in OpenMesh list

self.om.rolist[#].setContoursVisibility(True)

renders contours

self.om.rolist[#].recalculateContours()

appears to do the same as setContoursVisibility()

self.om.rolist[#].setContoursLineWidth(3.0)

sets contour line width, must be called before contour render

self.Save_Animation_Frames(object, 'filename', '.ext')

Saves all animated frames. object = self.om.rolist[#] and must have 'colors' attribute, and ext can be one of: .bmp,.png,.gif,.jpeg,.tiff,.eps

self.om.rolist[#].setColor([R,G,B])

Set the color of a rendered object (fibers, line, etc.)

self.om.rolist[#].setSize(2.0)

Set the size of an object (fibers, line, etc.)

self.om.getFirstQuad().play = 0

Do not play animation for EP when rendering frames. This us useful when saving animation frames as they may otherwise save out of order

self.om.renderer.viewer.currentCamera.Set(antialiased=value)

Set the antialiasing value from a script (where value = 0, 2, 3, 4, 8, 15, 24, 66)

self.om.renderer.viewer.currentCamera.ssao = True

Turn on (True) or off (False) Screen Space Ambient Occlusion from a script

Fitting

Command

import Module

Description

EP

Command

import Module

Description

self.CompileEPIonic()

Compile Ionic Model

self.CompileEPConductivity()

Compile Conductivity Model

self.CompileEP()

Compile both Ionic and Conductivity model

compileType

compiled binary type - "C Double Precision" (default), "C Single Precision", "CUDA Single Precision", or "CUDA Double Precision". (e.g. self.CompileEP(compileType = "CUDA Double Precision")

Biomechanics

Command

import Module

Description

Example

self.stored_data.basis.obj

get current basis functions

biomechanics06/animateNodes.py

self.stored_data.nodes.obj

from client.forms.NodeForm import NodeForm

get current nodes

biomechanics06/loadAndSnap.py