Continuity 6 Files

Previously known as ".pickle" files, .cont6 files contain serialized objects for the various parts of the problem.

Overview

  • Model
    • Mesh
      • Mesh
      • Imaging
      • Fitting
    • Properties
      • Biomechanics
      • Electrophysiology
    • External Conditions
      • Biomechanics
      • Electrophysiology
    • Misc

Mesh

  • Mesh
    • coord --> coord

    • dims --> dims

    • elem --> elem

    • nodes --> nodes

    • basis --> basis (gui_basis)

  • Fitting
    • data --> data (gui_data)

    • fit --> fit (gui_fit)

    • fit_constraints --> fit_constraints

  • Imaging
    • images --> images (gui_images)

    • vertCoords --> vertCoords (gui_vertCoords)

Properties

  • Biomechanics
    • circModel --> circModel (gui_circModel)

    • equ --> equ (gui_biomechanics_equ)

    • mat --> mat (gui_biomechanics_mat)

    • volume --> volume (gui_volume)

    • active --> active (gui_active)

  • Electrophysiology
    • epEquations --> epEquations (epEquations)

    • solvers --> solvers (gui_electrophys_solvers) [SOON TO BE OBSOLETE]

    • stim --> stim (gui_electrophys_stim) [SOON TO BE OBSOLETE]

External Conditions

  • Biomechanics
    • init --> init

  • Electrophysiology
    • ?

Misc

  • divisions --> divisions (gui_divisions)

  • bgcolor -->

  • light -->

  • renderer -->

  • sender -->

  • dims --> dims

Obsolete

  • nonlinResult

Unknown (Probably Obsolete)

  • sol --> sol (gui_biomechanics_sol)

  • dataFiber -->

  • dataField -->

  • renElements -->

  • renNodes -->

  • rootobj -->

  • strains
  • stress
  • gui_solutions
  • gui_equ
  • gui_initials
  • gui_materials

Scanning a Cont6 file

   1 for d in dir(self.stored_data):
   2         a = getattr(self.stored_data, d)
   3         if hasattr(a, "handle"):
   4                 print d,"-->", a.handle,
   5                 try:
   6                         print '(%s)'%a.obj['info']
   7                 except:
   8                         print ""